Genetic diversity and molecular epidemiology of the T strain of Plum pox virus

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dc.contributor.authorTeber S.
dc.contributor.authorCeylan A.
dc.contributor.authorGürcan K.
dc.contributor.authorCandresse T.
dc.contributor.authorUlubaş Serçe Ç.
dc.contributor.authorAkbulut M.
dc.contributor.authorAkbaş B.
dc.date.accessioned2019-08-01T13:38:39Z
dc.date.available2019-08-01T13:38:39Z
dc.date.issued2019
dc.departmentNiğde ÖHÜ
dc.description.abstractVery limited information is available on the origin, diversity and evolution of Plum pox virus (PPV) ‘Turkey’ (T) strain. Phylogenetic analyses based on partial sequences of 421 isolates and complete genome sequences of 57 isolates, representing the geographical distribution of PPV-T in Turkey, revealed the existence of several monophyletic and, in some cases, geographically limited groups within the PPV-T strain (Ankara-Konya1-Kayseri, Ankara-Balkan, Istanbul, Konya2 and Balkan). PPV-T diversity (0.018%) was found to be greater than that of PPV strains D and Rec but lower than that of the M strain when including the newly described and divergent M-Istanbul isolates, suggesting a long evolutionary history for PPV-T. The European part of Turkey in the Balkans, close to Bulgaria where PPV was identified for the first time, appears as a likely centre of origin for PPV-T isolates. The colonization of various parts of Turkey by diverse isolates from that region, followed by secondary local spread, is the most likely scenario for the diffusion of PPV-T in Turkey. © 2018 British Society for Plant Pathology
dc.description.sponsorshipThis study was supported by the Scientific and Technological Research Council of Turkey (project number 112O022) and the Research Fund of Erciyes University (project numbers FDK-2013-4253, FDA-2013-4713 and FYL-2014-5315).
dc.identifier.doi10.1111/ppa.12974
dc.identifier.endpage763
dc.identifier.issn0032-0862
dc.identifier.issue4
dc.identifier.scopus2-s2.0-85059469703
dc.identifier.scopusqualityQ1
dc.identifier.startpage755
dc.identifier.urihttps://dx.doi.org/10.1111/ppa.12974
dc.identifier.urihttps://hdl.handle.net/11480/1487
dc.identifier.volume68
dc.identifier.wosWOS:000466419500015
dc.identifier.wosqualityQ1
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthor[0-Belirlenecek]
dc.language.isoen
dc.publisherBlackwell Publishing Ltd
dc.relation.ispartofPlant Pathology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectAsia Minor
dc.subjectcomplete genome
dc.subjectplant virus
dc.subjectsharka
dc.subjectstone fruits
dc.subjectTurkey
dc.titleGenetic diversity and molecular epidemiology of the T strain of Plum pox virus
dc.typeArticle

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