Molecular Characterization of Turkish Onion Germplasm Using SSR Markers

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dc.contributor.authorHanci, Fatih
dc.contributor.authorGokce, Ali Fuat
dc.date.accessioned2019-08-01T13:38:39Z
dc.date.available2019-08-01T13:38:39Z
dc.date.issued2016
dc.departmentNiğde ÖHÜ
dc.description.abstractIn this study, molecular markers were used for the first time to study the genetic diversity of Turkish onion (Allium cepa L.) accessions. We used 83 turkish landraces, 3 breeding lines and 10 commercial varieties, in total 96 accessions, to study the genetic diversity. Bulked samples of 10 seeds were used to generate a representative profile of the accessions. Variability was evaluated at 46 microsatellite loci. We identified 308 alleles with these markers, out of which 303 were polymorphic. A dendrogram based on the UPGMA analysis grouped the 96 accessions into five main clusters. Dice's similarity coefficient ranged from 0.407 to 0.767 with an average of 0.587. The results showed that 44 out of the 46 SSR markers were convenient and polymorphic enough to distinguish all the studied accessions.
dc.description.sponsorshipAtaturk Central Horticultural Research Institute
dc.description.sponsorshipThe research was supported by the Ataturk Central Horticultural Research Institute.
dc.identifier.doi10.17221/162/2015-CJGPB
dc.identifier.endpage76
dc.identifier.issn1212-1975
dc.identifier.issn1805-9325
dc.identifier.issue2
dc.identifier.scopus2-s2.0-84975166302
dc.identifier.scopusqualityQ3
dc.identifier.startpage71
dc.identifier.urihttps://dx.doi.org/10.17221/162/2015-CJGPB
dc.identifier.urihttps://hdl.handle.net/11480/3786
dc.identifier.volume52
dc.identifier.wosWOS:000378158200004
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthor[0-Belirlenecek]
dc.language.isoen
dc.publisherCZECH ACADEMY AGRICULTURAL SCIENCES
dc.relation.ispartofCZECH JOURNAL OF GENETICS AND PLANT BREEDING
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAllium cepa L.
dc.subjectdiversity
dc.subjectgenetic resources
dc.subjectmicrosatellites
dc.subjectpolymorphism
dc.titleMolecular Characterization of Turkish Onion Germplasm Using SSR Markers
dc.typeArticle

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