NUCLEAR AND ORGANELLE GENES BASED PHYLOGENY OF DRYOMYS (GLIRIDAE, RODENTIA, MAMMALIA) FROM TURKEY

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dc.authoridSeker, Perincek Seckinozan/0000-0002-6103-4840
dc.authoridCOLAK, ERCUMENT/0000-0001-5826-1615
dc.contributor.authorKankilic, Teoman
dc.contributor.authorSeker, Perincek Seckinozan
dc.contributor.authorAydin, Burcu
dc.contributor.authorAltunbas, Derya
dc.contributor.authorSelvi, Engin
dc.contributor.authorYigit, Nuri
dc.contributor.authorColak, Ercument
dc.date.accessioned2024-11-07T13:34:05Z
dc.date.available2024-11-07T13:34:05Z
dc.date.issued2019
dc.departmentNiğde Ömer Halisdemir Üniversitesi
dc.description.abstractMolecular phylogeny, phylogeography and genetic structure of the genus Dryomys Thomas, 1906 from Turkey were identified by using partial sequences of beta-fibrinogen intron 7 and mitochondrially encoded 12S ribosomal RNA genes and also combined data of two genes. Within Dryomys nitedula species, both, nuclear and mitochondrial genes coherently separated the Thrace lineage from the other lineages in Anatolia. Contrary to this, complex and incomprehensible phylogenies were recovered for Anatolian populations of this species. The analysis of the combined data of these two genes resolved mentioned complexity and incongruity and made phylogeny compatible with the results of past studies for the relative position of the Anatolian lineages. Thus, the presence of four different lineages (one in Thrace and three in Anatolia) within D. nitedula in the localities exemplified across Turkey was confirmed. Genetic differentiation (K2P distances) between the lineages were moderate at the level of intraspecific diversity. In addition to this, genetic distance (K2P = 5.5%) determined between D. nitedula and D. laniger conformed the distance suggested for the separate species of mammals. Evolutionary divergence time estimations demonstrated that the probable divergence between D. laniger and D. nitedula and among its detected lineages started in the border of Late Miocene and Pliocene (5.3 Mya) and lasted to the beginning of the Calabrian Stage of Pleistocene (1.8 Mya) in line with the previous results obtained from fossil and molecular data.
dc.description.sponsorshipScientific Research Projects Coordination Unit of Nigde Omer Halisdemir University [Yultep Feb 2015/07]; Scientific and Technological Research Council of Turkey (TUBITAK) [113Z822]
dc.description.sponsorshipThis study was produced from the Master's Thesis of Burcu Aydin and Derya Altunbas. Financial support of the study was provided by both Scientific Research Projects Coordination Unit of Nigde Omer Halisdemir University [grant number: Yultep Feb 2015/07] and The Scientific and Technological Research Council of Turkey (TUBITAK) [grant number: 113Z822]. Tissue samples were obtained under the legal permission (no: 72784983-488.04-150036) given by the Ministry of Agriculture and Forestry, General Management of Nature Conservation and National Parks of the Republic of Turkey and ethics committee decision (no: 06/06/2018-2018-12-80) given by the Animal Experiments Local Ethics Committee of Ankara University.
dc.identifier.doi10.17109/AZH.65.4.399.2019
dc.identifier.endpage413
dc.identifier.issn1217-8837
dc.identifier.issue4
dc.identifier.scopus2-s2.0-85078275781
dc.identifier.scopusqualityQ3
dc.identifier.startpage399
dc.identifier.urihttps://doi.org/10.17109/AZH.65.4.399.2019
dc.identifier.urihttps://hdl.handle.net/11480/15789
dc.identifier.volume65
dc.identifier.wosWOS:000502546600006
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherHungarian Natural History Museum
dc.relation.ispartofActa Zoologica Academiae Scientiarum Hungaricae
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzKA_20241106
dc.subjectDryomys
dc.subjectphylogeny
dc.subjectbeta-fibrinogen intron 7
dc.subject12S ribosomal RNA
dc.subjectTurkey
dc.titleNUCLEAR AND ORGANELLE GENES BASED PHYLOGENY OF DRYOMYS (GLIRIDAE, RODENTIA, MAMMALIA) FROM TURKEY
dc.typeArticle

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