Contribution to the knowledge of genome size evolution in edible blueberries (genus Vaccinium)

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dc.authoridSULTANA, NUSRAT/0000-0003-1373-1286
dc.authoridGarcia, Sonia/0000-0002-3143-0527
dc.authoridVitales, Daniel/0000-0002-3109-5028
dc.contributor.authorSultana, Nusrat
dc.contributor.authorPascual-Diaz, Joan Pere
dc.contributor.authorGers, Ahsen
dc.contributor.authorIlga, Kubra
dc.contributor.authorSerce, Sedat
dc.contributor.authorVitales, Daniel
dc.contributor.authorGarcia, Sonia
dc.date.accessioned2024-11-07T13:32:44Z
dc.date.available2024-11-07T13:32:44Z
dc.date.issued2020
dc.departmentNiğde Ömer Halisdemir Üniversitesi
dc.description.abstractBACKGROUND: Vaccinium is one of the largest genera (ca. 500 species) of Ericaceae, well known for its edible and ornamental uses. Although there is certain karyological knowledge, information about genome size (GS) is scarce in the genus. OBJECTIVE: The main goal is providing GS data for several Vaccinium species with prevalence in Europe and Western Asia and analysing global GS variation in the genus, considering available data and phylogenetic context. METHODS: New GS assessments were obtained by flow cytometry and chromosome counts were verified. Phylogenetic analyses (using nuclear ITS, and chloroplastic matK and ndhF) were performed by Bayesian inference and reconstruction of ancestral GS by maximum parsimony. RESULTS: We obtained GS data for five Vaccinium species (13 populations). Three species are reported for the first time. Values (2C) ranged between 1.16-1.47 pg at the diploid (2n = 24) and between 3.13-3.16 pg at the tetraploid (2n = 48) levels. The five species here investigated have been placed and analysed in a reconstructed phylogenetic background (including 68 taxa). CONCLUSIONS: GS values of Vaccinium can be considered very small. The preliminary reconstruction of ancestral GS would point to a reduction in Vaccinium, although more data is needed to establish global GS evolutionary trend in the genus.
dc.description.sponsorshipDireccion General de Investigacion Cientifica y Tecnica (Spanish Government) [CGL2016-75694-P]; Generalitat de Catalunya (Ajuts a grups de recerca consolidats) [2017SGR01116]; government of Spain [RYC-2014-16608]; Erasmus+Student traineeship programme of Nigde Omer Halisdemir University
dc.description.sponsorshipThis work was supported by the Direccion General de Investigacion Cientifica y Tecnica (Spanish Government: CGL2016-75694-P, AEI/FEDER, UE) and the Generalitat de Catalunya (Ajuts a grups de recerca consolidats 2017SGR01116). S.G. benefited from a Ramon y Cajal contract (RYC-2014-16608) from the government of Spain and N.S., A.G. and K.I. are thankful to Erasmus+Student traineeship programme of Nigde Omer Halisdemir University, for providing the fellowship during the visit of Institut Botanic de Barcelona (IBB-CSIC). Eva Bartova, Teresa Garnatje, Oriane Hidalgo, Ales Kovarik, Albert Ruzafa and Joan Valles are thanked for providing material of Vaccinium for GS assessments and for technical support. Jaume Comas and Chari Gonzalez are also thanked for technical support in flow cytometric assessments.
dc.identifier.doi10.3233/JBR-190458
dc.identifier.endpage257
dc.identifier.issn1878-5093
dc.identifier.issn1878-5123
dc.identifier.issue2
dc.identifier.scopus2-s2.0-85084449337
dc.identifier.scopusqualityQ2
dc.identifier.startpage243
dc.identifier.urihttps://doi.org/10.3233/JBR-190458
dc.identifier.urihttps://hdl.handle.net/11480/15558
dc.identifier.volume10
dc.identifier.wosWOS:000541065600008
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherIos Press
dc.relation.ispartofJournal of Berry Research
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzKA_20241106
dc.subjectBerries
dc.subjectC-value
dc.subjectchromosome counts
dc.subjectflow cytometry
dc.subjectnuclear DNA amount
dc.subjectnuclear DNA content
dc.titleContribution to the knowledge of genome size evolution in edible blueberries (genus Vaccinium)
dc.typeArticle

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