Molecular characterization of Heterodera cruciferae Franklin, 1945 from cabbage fields in Nigde province, Turkey

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dc.authoridTOKTAY, HALIL/0000-0003-0814-7237
dc.contributor.authorToktay, Halil
dc.contributor.authorAkyol, Badel G.
dc.contributor.authorEvlice, Emre
dc.contributor.authorImren, Mustafa
dc.date.accessioned2024-11-07T13:32:08Z
dc.date.available2024-11-07T13:32:08Z
dc.date.issued2022
dc.departmentNiğde Ömer Halisdemir Üniversitesi
dc.description.abstractBackground The aim of this study was to identified cyst nematodes in the cabbage production areas in Nigde Province by molecular methods to underpin decision making for field control. The sequences of ribosomal DNA region (rDNA-ITS) and cytochrome oxidase subunit 1 (mtDNA-COI) were used for the first time for identification Heterodera cruciferae (cabbage cyst nematode) in Turkey. Methods and Results Heterodera cruciferae populations extracted from cabbage growing areas of Nigde Province and investigated using sequences of rDNA-ITS and mtDNA-COI. Similarities and differences between 13 geographic populations of H. cruciferae were detected in surveys during 2020-2021. DNA from single cysts was successfully amplified, and genetic variability was revealed within nematode populations. Based on these results, H. cruciferae is reported for the first time from Nigde Province, Turkey. This study showed clear discrimination among the sampled populations of H. cruciferae. Conclusion This finding is important for control and managing cabbage cyst nematode in cabbage fields in Turkey as more than one Heterodera spp. can occur. Future studies should investigate the population dynamics and control of H. cruciferae in fields in the sampled districts.
dc.description.sponsorshipTUBITAK of (Turkey Scientific and Technical Research Council) [219 O 455]
dc.description.sponsorshipThis study was funded by TUBITAK project no. 219 O 455 of (Turkey Scientific and Technical Research Council). The authors thank Prof. Ian Riley for advice during preparation of this manuscript, A/Prof. Eminur Elci for asissited molecular analyses in Nigde Omer Halisdemir University and A/Prof. Goksel Ozer in Bolu Abant Izzet Baysal for to molecular analyses. Authors would like to express their gratitude to cabbage farmers who allowed them to take soil samples from their fields in Nigde province.
dc.identifier.doi10.1007/s11033-022-07860-w
dc.identifier.endpage11562
dc.identifier.issn0301-4851
dc.identifier.issn1573-4978
dc.identifier.issue12
dc.identifier.pmid36097115
dc.identifier.scopus2-s2.0-85137904910
dc.identifier.scopusqualityQ2
dc.identifier.startpage11557
dc.identifier.urihttps://doi.org/10.1007/s11033-022-07860-w
dc.identifier.urihttps://hdl.handle.net/11480/15250
dc.identifier.volume49
dc.identifier.wosWOS:000852932600002
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofMolecular Biology Reports
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_20241106
dc.subjectCabbage
dc.subjectHeterodera cruciferae
dc.subjectmtDNA- COI
dc.subjectPhylogenetic analysis
dc.subjectrDNA-ITS
dc.subjectTurkey
dc.titleMolecular characterization of Heterodera cruciferae Franklin, 1945 from cabbage fields in Nigde province, Turkey
dc.typeArticle

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