Novel Centromeric and Subtelomeric Repetitive DNA Sequences for Karyotyping the Bambara Groundnut (Vigna subterranea L. Verdc.)

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dc.authoridTek, Ahmet L./0000-0002-3292-5142
dc.authoridKARA OZTURK, Sevim Dondu/0000-0001-7522-0575
dc.authoridKaralar, Didem/0000-0003-0844-5955
dc.contributor.authorTek, Ahmet L.
dc.contributor.authorOzturk, Sevim D. Kara D.
dc.contributor.authorYildiz, Huemeyra
dc.contributor.authorKaralar, Didem
dc.date.accessioned2024-11-07T13:25:04Z
dc.date.available2024-11-07T13:25:04Z
dc.date.issued2022
dc.departmentNiğde Ömer Halisdemir Üniversitesi
dc.description.abstractBambara groundnut (Vigna subterranea L. Verdc.) is an un-derutilized minor legume crop with climate resilience and great potential use in world agriculture. This study aimed to cytogenetically characterize the genome and chromosome properties of Bambara groundnut. We cloned, sequenced, and mapped a 50-bp centromere-specific tandem repeat on all chromosomes. In addition, a 400-bp subtelomeric repeat was discovered and mapped on a single pair of chromosomes. A Bambara groundnut karyotype was constructed using these novel repeats along with ribosomal RNA genes (45S and 5S) and telomeric DNA sequences. This study provides the first analysis of the genome and chromosome properties of Bambara groundnut. We discuss our findings in relation to genetic improvement of Bambara groundnut and centromere evolution in legume species.
dc.description.sponsorshipAyhan Sahenk Foundation
dc.description.sponsorshipDoctoral scholarships for S.D.K.OE. and H.Y. are awarded by Ayhan Sahenk Foundation. There are no other funding sources to report.
dc.identifier.doi10.1159/000521398
dc.identifier.issn1424-8581
dc.identifier.issn1424-859X
dc.identifier.pmid35021180
dc.identifier.scopus2-s2.0-85123513167
dc.identifier.scopusqualityQ3
dc.identifier.urihttps://doi.org/10.1159/000521398
dc.identifier.urihttps://hdl.handle.net/11480/14466
dc.identifier.wosWOS:000745639000001
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherKarger
dc.relation.ispartofCytogenetic and Genome Research
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_20241106
dc.subjectBambara groundnut
dc.subjectCentromeric DNA
dc.subjectRepetitive DNA
dc.subjectSubtelomere
dc.subjectTAREAN
dc.titleNovel Centromeric and Subtelomeric Repetitive DNA Sequences for Karyotyping the Bambara Groundnut (Vigna subterranea L. Verdc.)
dc.typeArticle

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