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    A GWAS to identify the cereal cyst nematode (Heterodera filipjevi) resistance loci in diverse wheat prebreeding lines
    (Springer Heidelberg, 2021) Dababat, Abdelfattah; Arif, Mian Abdur Rehman; Toktay, Halil; Atiya, Osameh; Shokat, Sajid; E-Orakci, Gul; Imren, Mustafa
    Yield losses because of cereal cyst nematodes could be as high as 92%, causing a bottleneck for wheat production. An integrated approach (application of pesticides, crop rotation, and use of host resistance) is needed to manage this devastating pathogen where resistant cultivars are considered most effective. This necessitates the identification of nematode-resistant sources in the available germplasm. Here, we report on the genetic mapping of nematode resistance in 255 diverse prebreeding lines (PBLs) employing an association mapping strategy. Altogether, seven additive quantitative trait loci (QTL) were identified on chromosomes 1A, 2A, 2B, 2D, 3A, 6B, and 6D explaining a maximum of 9.42% phenotypic variation where at least five QTL (on chromosomes 2A, 2B, 2D, 6B, and 6D) are located on the same chromosomes that harbor the already known nematode resistance genes. Resistant PBLs carried Aegilops squarrosa (436) in their pedigree which could be the possible source of positive alleles. To add to it, better yield performance of the identified nematode-resistant lines under stress conditions indicates that the germplasm can provide both nematode resistance and high-yielding cultivars.
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    Association analysis of resistance to cereal cyst nematodes (Heterodera avenae) and root lesion nematodes (Pratylenchus neglectus and P-thornei) in CIMMYT advanced spring wheat lines for semi-arid conditions
    (JAPANESE SOC BREEDING, 2016) Dababat, Abdelfattah A.; Ferney, Gomez-Becerra Hugo; Erginbas-Orakci, Gul; Dreisigacker, Susanne; Imren, Mustafa; Toktay, Halil; Ogbonnaya, Francis
    To identify loci linked to nematode resistance genes, a total of 126 of CIMMYT advanced spring wheat lines adapted to semi-arid conditions were screened for resistance to Heterodera avenae, Pratylenchus neglectus, and P. thornei, of which 107 lines were genotyped with 1,310 DArT. Association of DArT markers with nematode response was analyzed using the general linear model. Results showed that 11 markers were associated with resistance to H. avenae (pathotype Ha21), 25 markers with resistance to P. neglectus, and 9 significant markers were identified to be linked with resistance to P thornei. In this work we confirmed that chromosome 4A (similar to 90-105 cM) can be a source of resistance to P. thornei as has been recently reported. Other significant markers were also identified on chromosomal regions where no resistant genes have been reported for both nematodes species. These novel QTL were mapped to chromosomes 5A, 6A, and 7A for H. avenae; on chromosomes 1A, 1B, 3A, 3B, 6B, 7AS, and 7D for P. neglectus; and on chromosomes 1D, 2A, and 5B for P. thornei and represent potentially new loci linked to resistance that may be useful for selecting parents and deploying resistance into elite germplasm adapted to regions where nematodes are causing problem.
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    Characterization of Potato Golden Cyst Nematode Populations (Globodera rostochiensis) in Turkey
    (Friends Science Publ, 2020) Toktay, Halil; Evlice, Emre; Imren, Mustafa; Ozer, Goksel; Ali, Muhammad Amjad; Dababat, Abdelfattah
    Golden potato cyst nematode, Globodera rostochiensis (Wollenweber) Behrens, is one of the most important soilborne pathogens causing economic losses in potato. The nematode is known to occurin several countries including Turkey and has a worldwide regulatory concern. In this study, identification and genetic diversity of G. rostochiensis specimens obtained from the main potato producing areas of Turkey were determined. Twenty -five of 35 soil samples collected from the provinces of Izmir, Nevsehir and Nigde were found to contain G. rostochiensis. The variation between G. rostochiensis populations was determined when examined according to ecological and pathogenic characteristics of nematode in Turkey. The cysts of G. rostochiensis were identified by measuring the morphological characters using perennial patterns, vulval cone, vulval basin and juveniles. Phylogenetic analysis of the Large Sub Unit (LSU) region of rDNA sequences was used to assess the inter or intra phylogenetic relationships between the nematode populations. The phylogenetic analyses demonstrated that the nematode specimens from Turkey cluster with Globodera spp. and signified the presence of single species of G. rostochiensis. As a result, morphological, morphometric and molecular methods were successfully combined for identification and characterization of G. rostochiensis. The frequency of G. rostochiensis in regulatory samples frompotato -producing areas is becoming increasingly important. The morphological characterization has several complications in the detection of this quarantine nematode, using of this combination is beneficial for a reliable and quick diagnostic for these nematodes which is crucial for regulatory services and growers. The results might help to investigate different ecotypes of G. rostochiensis for comprehensive understanding about physiology, ecology , and biology of the genus Globodera for its effective management in Turkey. (C) 2020 Friends Science Publishers
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    Combined Application of Biochar and Biocontrol Agents Enhances Plant Growth and Activates Resistance Against Meloidogyne incognita in Tomato
    (Springer, 2021) Arshad, Usman; Azeem, Farrukh; Mustafa, Ghulam; Bakhsh, Allah; Toktay, Halil; McGiffen, Milt; Nawaz, Muhammad Amjad
    Biochar (BC) is known to enhance plant growth and may activate plant resistance to various soil borne pathogens. In this experiment, the rice husk (RH) BC was combined with biocontrol agents (BCAs), Bacillus subtilis and Trichoderma harzianum against Meloidogyne incognita in tomato and the efficacy of BC and BCAs in boosting overall plant biomass assessed side by side. BCAs along with 3% RH BC were applied to potting soil, tomato plants were transplanted, and then the soil was inoculated with second stage juveniles of Meloidogyne incognita. Bacillus subtilis +3% RH BC improved overall plant growth and reduced M. incognita damage. To unravel the resistance at the molecular level, root samples were taken 6- and 12-days post inoculation (dpi) to measure the expression of two resistance genes, PR-1b and JERF3, with the help of quantitative real-time polymerase chain reaction (qRT-PCR). The expression of PR-1b was upregulated 6 dpi for only BCAs while JERF3 remained unchanged except in only Bacillus subtilis treated plants. Similarly, the expression of both genes was found to be upregulated in some combined treatments at 12 dpi. The results suggested that the 3% BC application with BCAs effectively manages root-knot nematode, enhances overall plant biomass, and triggers defense related genes in tomato plants.
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    Determination of resistance against to Cereal cyst nematode, Heterodera avenae (Wollenweber, 1924) in some wheat germplasm
    (ENTOMOLOGICAL SOC TURKEY, EGE UNIV, 2013) Imren, Mustafa; Toktay, Halil; Bozbuga, Refik; Dababat, Amer; Ozkan, Hakan; Elekcioglu, I. Halil
    The cereal cyst nematode, Heterodera avenae is one of the most important pests of wheat in many countries in the world with different climatic types. Heterodera. avenae is commonly distributed in the Eastern Mediterranean region of Turkey and all populations investigated belong to the Hal group, Ha21 pathotype. This study was aimed to found resistance sources from the national wheat varieties, wheat wild genotypes and international wheat genotypes against H. avenae Karlik Adana population (Ha21 pathotype). Results showed that four national wheat varieties, seventeen wheat wild genotypes and twenty three international wheat genotypes were found to be moderately resistant against to Eastern Mediterranean Region of Turkey H. avenae population. Among these genotypes, the national bread wheat variety, Adana 99 (PFAU/SERI82//BOG"S"), some wild genotypes and international genotypes can be used in national wheat breeding programmes. However, Crel was not showed completely resistant against H. avenae. Additionally resistance sources in of Turkish national wheat and wild genotypes needs to be determined.
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    Determination of Resistance Levels of National Potato Cultivars and Clones Against Golden Cyst Nematode Pathotype Ro2/3 via Phenotypic and DNA Marker-Assisted Characterization
    (Springer, 2024) Avci, Gulten Kacar; Canhilal, Ramazan; Toktay, Halil; Imren, Mustafa; Unlenen, Levent; Pirlak, Ugur
    Potato (Solanum tuberosum L.) is one of our important agricultural products, which is the main food source for people in T & uuml;rkiye, as well as all over the world. There are many diseases and pests that reduce productivity in potato plant production. Potato cyst nematodes (Tylenchida: Heteroderidae) are pests that are on the quarantine list of the European and Mediterranean Plant Protection Organization and cause serious yield losses. Since they are soil-borne pathogens and there is no effective chemical control, the most successful control method is to use resistant cultivars. The aim of the study was to determine the resistance levels of local and national potato cultivars and clones developed by the Nigde Potato Research Institute against the Globodera rostochiensis Ro2/3 pathotype using molecular marker analysis and biotesting methods. The biotest study was carried out by inoculating 7500 eggs and larvae of the Globedera rostochiensis pathotype Ro2/3 into pots. In the molecular marker analysis, resistance was investigated with TG689, 57R, Gro1-4 markers. While all cultivars and clones except Bettina were grouped as sensitive in the biotesting study, the H1 resistance gene was detected in Onaran, & Uuml;nlenen, Leventbey, Muratbey, Nahita, Agria, Madeleine, Desiree and Bettina cultivars by molecular marker analysis. H1 and Gro1-4 resistance genes were detected in the PAE 13-08-07, PAE 13-08-08 and PAE 13-08-14 clones used in the experiment. The results showed that clones developed by the Potato Research Institute exhibited highly resistant marker alleles for the Ro2/3 pathotype of G. rostochiensis. The results of phenotyping study and the molecular marker study were not similar.
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    Effect of Mi Gene and Nematode Resistance on Tomato Genotypes Using Molecular and Screening Assay
    (Allerton Press Inc, 2020) Bozbuga, Refik; Dasgan, H. Yildiz; Akhoundnejad, Yelderem; Imren, Mustafa; Gunay, Ozlem C.; Toktay, Halil
    The Mi gene is known to involve in the resistance response to some Root knot nematodes, Meloidogyne spp. in tomato plants Lycopersicon esculentum. Root knot nematodes cause significant damages to almost all crops in the world. Among Meloidogyne species, Meloidogyne incognita is one of the most damages species causing a vast amount of crop loss including tomato plants. The resistance gene may be found in some tomato genotypes or cultivars. Determining the resistance gene, Mi, in tomato cultivars is very important to control root knot nematodes. For this purpose, this study was conducted in 99 tomato genotypes that were screened for resistance against Meloidogyne incognita in molecular and screening assays. Results revealed that Mi gene was only determined in one genotype (Tom113). The result of the screening assay indicated that one of the genotypes (Tom113) showed an immune reaction against the nematode; two genotypes (Tom146, Tom141) were found intermediate; 17 genotypes moderately susceptible, 43 genotypes susceptible and 36 genotypes found highly susceptible. Results of the screening assay confirmed the presence of Mi gene in a tomato genotype, which accompanied with a decreased ability for the nematode in causing the infection. Immune and some promising genotypes are thought as important genetic tools for breeding studies for future works.
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    Heterodera schachtii (Nematoda: Heteroderidae) Associated with Cabbage-Cultivation Systems in Anatolia Region of Türkiye
    (Mdpi, 2024) Akyol, Gulsum Badel; Yuksel, Ebubekir; Elci, Eminur; Bozbuga, Refik; Dababat, Abdelfattah; Imren, Mustafa; Toktay, Halil
    Heterodera schachtii (Schmidt, 1871) (Nematoda: Heteroderidae) is one of the most widespread plant-parasitic nematodes (PPNs) associated with cabbages, which cause severe yield losses in cruciferous vegetables. This study aimed to improve the current understanding of the prevalence and detection of H. schachtii in the cabbage-growing areas of Ni & gbreve;de Province, T & uuml;rkiye. Field surveys were conducted between November and December 2021, and 100 soil samples were collected immediately after cabbage harvesting. Heterodera schachtii populations were identified by morphological and morphometric methods along with Internal Transcribed Spacer of the ribosomal region (ITS-rDNA) and Cytochrome Oxidase Subunit (COI-mtDNA) sequencing. The mean body length of H. schachtii was 463 +/- 7 mu m, while stylet and hyaline length ranged between 20.7-27.8 mu m and 20.1-32.1 mu m, respectively. Nearly half of the surveyed areas were infested with H. schachtii with a 41% incidence rate. However, the Merkez District had the highest proportion of infested fields with an over 51% incidence rate. The population density was determined in 41 samples with a mean of 79.5 cysts per 250 g of soil. These results will help to determine the control and management strategies of H. schachtii.
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    Identification and prevalence of potato cyst nematodes and root-knot nematodes in the potato production areas of Izmir Province, Turkey
    (Entomological Soc Turkey, Ege Univ, 2020) Demirbas Pehlivan, Hulya; Kaskavalci, Galip; Kasapoglu Uludamar, Ece B.; Toktay, Halil; Elekcioglu, I. Halil
    Globodera spp.and Meloidogyne spp. were identified using morphological and molecular methods. Also, the distribution and population densities of these nematodes were determined in potato cultivation areas of Izmir (Turkey) in 2015. Two hundred and twenty-three soil samples were collected during the survey and 32 samples were found to be infested with Globodera spp. and 41 samples with Meloidogyne spp. The identification of nematodes was made morphologically using perennial patterns of cyst/female individuals and morphometrics of second stage juveniles. Also, species specific primers were used for molecular identification. Only Globodera rostochiensis (Wollenweber, 1923) Skarbilovich, 1959 (Tylenchida: Heteroderidae) were found in the samples that contained cyst nematodes. Also, the root-knot nematodes, Meloidogyne chitwoodi Golden, O'Bannon, Santo & Finley, 1980, Meloidogyne hapla (Chitwood, 1949), Meloidogyne incognita (Kofoid & White, 1919) Chitwood, 1949, and Meloidogyne javanica (Treub, 1885) Chitwood, 1949 (Tylenchida: Meloidogynidae) were found. The prevalence rates of Meloidogyne species were determined as 2.4, 12.2, 61.0 and 24.4%, respectively. In terms of the number of individuals in soil, all G. rostochiensis (10 eggs/g soil) and M. chitwoodi (1 juvenile/250 cm(3) soil) population levels were detected above the economic damage thresholds for potato production. Also, two populations of M. incognita (0.5-2 juvenile/250 cm(3) soil) were found above the specified threshold levels.
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    Incidence of cereal cyst nematodes in the East Anatolia Region in Turkey
    (RUSSIAN ACAD SCI, INST PARASITOLOGY, 2015) Toktay, Halil; Imren, Mustafa; Ocal, Atilla; Waeyenberge, Lieven; Viaene, Nicole; Dababats, Abdelfattah
    Cereal cyst nematodes (Heterodera spp., CCN) are major economic plant-parasitic nematodes of wheat grown in the East Anatolian region of Turkey. Identification of CCN species is essential for choosing the right control strategy. The morphological and molecular characteristics of cyst nematodes (Heterodera spp.) were determined for specimens collected from wheat fields from different provinces of the East Anatolia region in Turkey. Fifty-six percent of wheat fields were infested with cereal cyst nematodes. Based on morphological characterisations and molecular techniques, two Heterodera species, H. filipjevi and H. latipons, were identified. Heterodera filipjevi was the dominant species in the wheat fields of Elazig, Malatya, Sivas, Erzurum, Erzincan, Igdir and Kars provinces, while H. latipons was found only in three provinces (Erzincan, Elazig and Malatya). This is the first detection of H. latipons in the East Anatolia region. Genetic dissimilarity was higher within H. filipjevi populations than within H. latipons populations. While intraspecific polymorphism was not observed within H. latipons, it was recorded in H. filipjevi populations. Our results showed a clear separation of the two cyst nematode species using both morphological and molecular tests, and confirmed the link between genetic and morphological traits.
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    Influence of Climate Conditions and Biofertilizers on Soybean Yield in Southeastern Kazakhstan
    (International Information and Engineering Technology Association, 2023) Kenenbayev, Serik; Yessenbayeva, Gulvira; Zhanbyrbayev, Yeldos; Bekturganov, Aidos; Dutbayev, Yerlan; Toktay, Halil
    Soybean (Glycine max) serves as a crucial legume crop in Kazakhstan, with an annual production volume approximating 282,185 t. Nevertheless, in southeastern Kazakhstan, notably the Almaty region, minimal research has been conducted to investigate the impact of fluctuating weather conditions and biofertilizer variability on soybean yields. As a response to the dynamic climate, particularly in light of technogenic influences, and evolving biofertilizer formulations, the present study seeks to elucidate the effects of abiotic factors on soybean productivity and symbiotic process activation. Field experiments were conducted to assess the influence of abiotic conditions during critical soybean development stages. Comparisons were made between the years 2020, 2021, and 2022, with the low precipitation in June 2021 and high average daily temperatures during grain filling and bean ripening stages observed to create critical abiotic stress conditions. These conditions were found to significantly influence soybean yields, with 2020 and 2022 yielding superior performance in terms of bean and seed count, seed weight, and the weight of 1,000 seeds. Biofertilizers including BioEcoGum, Biogumus, HanselPlant, Manure, and Tumat were applied to the soil, and their impact on the soil's microbial population and soybean yield parameters was assessed. A marked increase in the number of nodules per plant, the weight of individual nodules, nitrogen-fixing microorganisms, bean count, seed count, and overall seed weight per plant was observed in biofertilizer-treated soil compared to untreated control plots. In conclusion, the study underscores the influence of abiotic stressors on soybean productivity in Kazakhstan's sharply continental climate. The findings suggest that the strategic use of biofertilizers offers a compelling approach to enhance soybean yields under these challenging conditions. ©2023 IIETA.
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    Investigation the Efficiency of Resistance Gene, Cre1, Against Mediterranean Cereal Cyst Nematode: Heterodera latipons Franklin (Tylenchida: Heteroderidae)
    (ANKARA UNIV, FAC AGR, 2014) Imren, Mustafa; Kasapoglu, Ece Bortecine; Dababat, Abdelfattah; Toktay, Halil; Elekcioglu, Ibrahim Halil
    Cereal cyst nematodes (Heterodera avenae group) are important pests of wheat; they include the three most important species of cereal cyst nematodes: Heterodera avenae Wollenweber, H. latipons Franklin and H. filipjevi (Madzhidov) in Turkey that were determined in different wheat growing areas. It was reported that Mediterranean cereal cyst nematode, Heterodera latipons which is widely found in the centre of the durum wheat growing area -South-eastern Anatolia region-in our country was reaching the economical threshold in many locations. It is known that the use of resistant/tolerant wheat varieties is the most effective controlling method against cyst nematodes in the wheat cultivation. Nowadays, nine different resistance genes (Cre genes), which are transferred from wild wheat species to wheat cultivated forms are available. In this study, the efficiency of the resistance gene, Cre1, against the population of H. latipons from Gaziantep (Karkamis) was investigated. In the study, 38 genotypes carrying Cre1 gene and 26 genomes lacking resistance genes; this gives a total 64 wheat genotypes which are produced by parental crossing of SILVERSTAR containing the resistance gene, Cre1, in its genome, SOKOLL, CALINGIRI, GOLDMARKER, CROC_1/AE.SQUARROSA(224)//OPATA, FRAME, STYLET and PASTOR were used against H. latipons in the experiment. Among the 64 genotypes; 20 were resistant, 32 were moderately resistant and 12 were moderately susceptible to the nematode. Ten resistant, 20 moderately resistant and 8 moderately susceptible lines were determined against H. latipons that these 38 lines carried the Cre1 gene in their genome. Within this study, the resistant gene, Cre1, was not found to be completely resistant against H. latipons, but its 78% efficiency rate was found to be successful: therefore, it was concluded that it can be used against H. latipons in national wheat breeding programs. Furthermore, PASTOR, SOKOLL and CROC_1/AE.SQUARROSA(224)//OPATA wheat genotypes were determined as good resistance source against H. latipons.
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    molecular characterization of Heterodera cruciferae Franklin, 1945 from cabbage felds in Nigde province, Turkey (Sep, 10.1007/s11033-022-07860-w, 2022)
    (Springer, 2023) Toktay, Halil; G. Akyol, Badel; Evlice, Emre; Imren, Mustafa
    [Abstract Not Available]
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    Molecular characterization of Heterodera cruciferae Franklin, 1945 from cabbage fields in Nigde province, Turkey
    (Springer, 2022) Toktay, Halil; Akyol, Badel G.; Evlice, Emre; Imren, Mustafa
    Background The aim of this study was to identified cyst nematodes in the cabbage production areas in Nigde Province by molecular methods to underpin decision making for field control. The sequences of ribosomal DNA region (rDNA-ITS) and cytochrome oxidase subunit 1 (mtDNA-COI) were used for the first time for identification Heterodera cruciferae (cabbage cyst nematode) in Turkey. Methods and Results Heterodera cruciferae populations extracted from cabbage growing areas of Nigde Province and investigated using sequences of rDNA-ITS and mtDNA-COI. Similarities and differences between 13 geographic populations of H. cruciferae were detected in surveys during 2020-2021. DNA from single cysts was successfully amplified, and genetic variability was revealed within nematode populations. Based on these results, H. cruciferae is reported for the first time from Nigde Province, Turkey. This study showed clear discrimination among the sampled populations of H. cruciferae. Conclusion This finding is important for control and managing cabbage cyst nematode in cabbage fields in Turkey as more than one Heterodera spp. can occur. Future studies should investigate the population dynamics and control of H. cruciferae in fields in the sampled districts.
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    Morphological and Biochemical Changes in the Mediterranean Cereal Cyst Nematode (Heterodera latipons) during Diapause
    (Mdpi, 2024) Abumuslem, Motasem; Toktay, Halil; Sadder, Monther T.; Dababat, Abdelfattah A.; Salem, Nida' M.; AL-Banna, Luma
    The cereal cyst nematode (Heterodera latipons) is becoming an economically important species in global cereal production as it is being identified in many new cereal cultivated areas and causes significant losses. Consequently, understanding its biology becomes crucial for researchers in identifying its vulnerabilities and implementing effective control measures. In the current study, different morphological and biochemical changes of H. latipons cysts containing eggs with infective juveniles from a barley field in Jordan were studied during the summer of 2021, at two sample dates. The first, at the harvest of the cereal crop (June 2021), when the infective second-stage juveniles (J2s) were initiating diapause, and the second, before planting the sequent cereal crop (late October 2021), when the J2s were ending diapause. The studied population was characterized morphologically and molecularly, showing 98.4% molecular similarity to both JOD from Jordan and Syrian 300 isolates of H. latipons. The obtained results and observations revealed that there were dramatic changes in all the investigated features of the cysts and eggs they contained. Morphological changes such as cyst color, sub-crystalline layer, and thickness of the rigid eggshell wall were observed. A slight change in the emergence time of J2s from cysts was observed without any difference in the number of emerged J2s. The results of biochemical changes showed that the total contents of carbohydrates, glycogen, trehalose, glycerol, and protein were higher in cysts collected in October when compared to those cysts collected in June. The SDS-PAGE pattern indicated the presence of a protein with the size of ca. 100 kDa in both sampling dates, whereas another protein (ca. 20 kDa) was present only in the cysts of October. Furthermore, the expression of trehalase (tre) gene was detected only in H. latipons collected in October. The outcomes of this study provide new helpful information that elucidates diapause in H. latipons and may be used for the implementation of new management strategies of cyst nematodes.
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    Morphological and molecular identification of a new species Meloidogyne artiellia (Franklin) on wheat fauna in Turkey
    (ENTOMOLOGICAL SOC TURKEY, EGE UNIV, 2014) Imren, Mustafa; Ozarslandan, Adem; Kasapoglu, Ece B.; Toktay, Halil; Elekcioglu, Ibrahim Halil
    Root-knot nematodes (Meloidogyne spp.) are among some of the most economically important plant parasitic nematodes in the world. It is known that the nematode belong to Meloidogyne genus causes significantly crop losses in vegetables and cereals. The root-knot nematodes, M. artiellia causes damages especially cereals, legumes and cruciferous crops. Isolates of M. artiellia recovered from root and soil samples collected from wheat fields in 2012 growing season were firstly identified by using morphological and molecular aspects in Hatay province of Turkey. M. artiellia was morphologically identified by using morphological features and allometric criteria of second stage juvenile and female. Also, it was molecularly identified by using the sequences of partial mitochondrial DNA cytochrome C oxidase subunit (COI) gene region and clearly separated from other species.
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    Morphological and molecular identification of plant parasitic nematodes in wheat fields of Eastern Anatolian Region (Türkiye)
    (Plant Protection Central Research Institute, 2024) Akyol, Gülsüm Badel; Toktay, Halil
    The aim of this study is to identify plant-parasitic nematodes molecularly and morphologically in wheat (Triticum spp.) fields in the Eastern Anatolia Region (Türkiye) between 2017-2019. For this purpose, a total of 258 soil samples were collected from 7 provinces (Erzincan, Elazığ, Erzurum, Iğdır, Kars, Malatya, and Sivas) in the Eastern Anatolia Region. Nematodes were morphologically identified using a light microscope at the genus (some of them species) level. DNA extraction was performed and PCR products were used to DNA sequencing and nucleotide analysis for 28S ribosomal DNA region by comparing the results with the database. According to the obtained data, a total of 20 genera and 7 species belonging to 2 orders and 9 families were identified: H. digonicus Perry, 1959; H. canadensis Waseem, 1961; H. vulgaris Yuen, 1964 (Nematoda: Hoplolaimidae); Ditylenchus myceliophagus Goodey, 1958 (Nematoda: Anguinidae); Amplimerlinius macrurus (Goodey, 1932) (Nematoda: Dolichodoridae); Scutylenchus quadrifer (Andrassy, 1954); (Nematoda: Dolichodoridae), and Pratylenchoides alkani Yüksel, 1977 (Nematoda: Pratylenchidae). H. vulgaris was identified at the species level using molecular techniques. The rates of presence of economically important plant parasitic nematodes were determined as 73%, 43%, 36%, 33% and 28% for Ditylenchus spp., Pratylenchus spp., Aphelenchus spp., Xiphinema spp. and Helicotylenchus spp. respectively. It is thought that the results obtained will help to plan nematode control methods in the region. © 2024, Plant Protection Central Research Institute. All rights reserved.
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    Occurrence and identification of cereal cyst nematode, Heterodera filipjevi (Nemata: Heteroderidae), in Bolu province of Turkey
    (Organization of Nematologists of Tropical America, 2016) Imren, Mustafa; Toktay, Halil; Kutuk, Halil; Dababat, Abdelfattah A.
    Cereal cyst nematodes, Heterodera filipjevi, parasitize the roots of wheat and cause significant yield losses around the world. Cereal cyst nematodes are one of the most important and endemic problems in wheat-growing areas especially where rainfall is limited and monoculture crop production practices exist. In Turkey, cereal cyst nematodes are considered among the most damaging pests in wheat. Identifying cyst nematode species and determining their prevalence and distribution in Turkey are important for predicting potential spread in the future. This survey aimed to identify cyst nematode species and to assess their prevalence in cereal growing areas of Bolu province in Turkey. Cereal cyst nematode cysts were found in 83% of the surveyed fields. Prevalence of cysts was greater in cereal-growing areas in the provincial center and in the Gerede district. Morphological features of second-stage juveniles and cysts were examined, and DNA was extracted from second-stage juveniles and the species-specific Sequence Characterized Amplified Region (SCAR) primers were used for molecular identification. Based on both morphological and molecular methods, all samples were identified as H. filipjevi. This study was the first comprehensive investigation of H. filipjevi prevalence in cereal fields in Bolu. This information is of value to alert personnel of wheat breeding programs to develop local resistant varieties to target H. filipjevi.
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    OCCURRENCE AND IDENTIFICATION OF CEREAL CYST NEMATODE, HETERODERA FILIPJEVI (NEMATA: HETERODERIDAE), IN BOLU PROVINCE OF TURKEY
    (Organization Trop Amer Nematologists, 2016) Imren, Mustafa; Toktay, Halil; Kutuk, Halil; Dababat, Abdelfattah A.
    Cereal cyst nematodes, Heterodera filipjevi, parasitize the roots of wheat and cause significant yield losses around the world. Cereal cyst nematodes are one of the most important and endemic problems in wheat-growing areas especially where rainfall is limited and monoculture crop production practices exist. In Turkey, cereal cyst nematodes are considered among the most damaging pests in wheat. Identifying cyst nematode species and determining their prevalence and distribution in Turkey are important for predicting potential spread in the future. This survey aimed to identify cyst nematode species and to assess their prevalence in cereal growing areas of Bolu province in Turkey. Cereal cyst nematode cysts were found in 83% of the surveyed fields. Prevalence of cysts was greater in cereal-growing areas in the provincial center and in the Gerede district. Morphological features of second-stage juveniles and cysts were examined, and DNA was extracted from second- stage juveniles and the species-specific Sequence Characterized Amplified Region ( SCAR) primers were used for molecular identification. Based on both morphological and molecular methods, all samples were identified as H. filipjevi. This study was the first comprehensive investigation of H. filipjevi prevalence in cereal fields in Bolu. This information is of value to alert personnel of wheat breeding programs to develop local resistant varieties to target H. filipjevi.